BIOLOGY 120 000 (000): Concepts in Biology w/Lab
Brommer, TT, 10:00-11:15, MAX: 96, 1462 Clifton Road, Room 230

NOTE: YOU MUST ALSO REGISTER FOR A 120 LABORATORY. Dates and times are as follows:

LAB:
LB1, Tu, 2:30-5:30, MAX: 24, 1462 Clifton Road, Room 117
LB2, Tu, 6:30-9:30, MAX: 24, 1462 Clifton Road, Room 117
LC1, W, 2:30-5:30, MAX: 24, 1462 Clifton Road, Room 117
LD1, Th, 2:30-5:30, MAX: 24, 1462 Clifton Road, Room 117
LE1, F, 2:30-5:30, MAX: 0, 1462 Clifton Road, Room 117 (if needed)

Content: This course discusses principles and concepts of modern biology as they relate to the student's life at Emory University. Lectures will cover basic biology concepts and use the daily lives of college students as examples. The laboratory will directly follow the information discussed in lecture using scientific experimental and observational investigations to reinforce lecture topics and activities. Assessments in this course include quizzes, 2 exams, small assignments, in-class activities, and a final project presented in the classroom.

Texts:
· Campbell, N.A., L.G. Mitchell, and J.B. Reece. Biology Concepts and Connections, 5^th Edition (+ FREE CD-ROM and Scientific American Current Issues in Biology Readings, Volumes 1, 2, and 3). (Benjamin-Cummings) (LECTURE - REQUIRED)
· Campbell, N.A., et al. Study Guide for Biology Concepts and Connections, 5th Edition. (Benjamin-Cummings) (LECTURE - OPTIONAL)

Particulars: Three lecture tests, one lecture presentation or poster session and paper, written laboratory assignments, and tests. This course is NOT applicable to a science major, including biology majors and the premedical program (but does meet the GER requirements for a life science laboratory). Science majors should NOT take this course.

BIOLOGY 142 (000-003): Foundations of Modern Biology II: Molecular Genetics, w/Lab
Spell, (000), MWF, 11:45-12:35, MAX: 100, 1462 Clifton Road, Room 230
Fritz, (001), MWF, 12:50-1:40, MAX: 100, 1462 Clifton Road, Room 230
Finnerty, (002), TT, 11:30-12:45, MAX: 100, 1462 Clifton Road, Room 230
L'Hernault, (003), TT, 1:00-2:15, MAX: 100, 1462 Clifton Road, Room 230

NOTE: YOU MUST ALSO REGISTER FOR A 142 LABORATORY. Dr. Alexander Escobar is the lab director. Dates and times are as follows:

LAB:
LB1, Tu, 2:30-5:30, MAX: 120, 1462 Clifton Road, TBA
LC1, W, 2:30-5:30, MAX: 120, 1462 Clifton Road, TBA
LD1, Th, 2:30-5:30, MAX: 96, 1462 Clifton Road, TBA
LE1, F, 2:30-5:30, MAX: 72, 1462 Clifton Road, TBA

Content: Biology 141 and 142 will provide a topic-driven overview of molecular and cellular biology and genetics. The second semester (142) will cover molecular and developmental genetics. The topics covered in class will address major issues in human biology and medicine. The integrated lecture and lab will emphasize the basic principles and critical thinking involved in modern biological discovery. In lab, students will design and perform experiments using several important model systems.

Texts:
· Freeman, Scott. Biological Science: Volume I: The Cell, Genetics, and Development (with rebate coupon for a PRS (personal response device)). (Pearson/Prentice-Hall) (LECTURE-REQUIRED) (The PRS devices ("clickers") will be required for some of the class sections and may be purchased at the Emory Book Store.)
· Burggren, W. Student Study Guide for Biological Science: Volume I: The Cell, Genetics, and Development. (Pearson/Prentice-Hall) (LECTURE-OPTIONAL)
· Griffiths, et al. An Introduction to Genetic Analysis, 9th Edition. (W.H. Freeman) (LECTURE-REQUIRED)
· Fixsen, William D. et al. Solutions MegaManual for An Introduction to Genetic Analysis, 9th Edition. (W.H. Freeman) (LECTURE-OPTIONAL)
· Knisely, Karin. A Student Handbook for Writing in Biology, 2nd Edition. (Sinauer/Freeman) (LAB-REQUIRED)
· Laboratory Notebook. (May be purchased in the Emory Bookstore.) (LAB-REQUIRED)

Particulars: Biology 141 and 142 are required of all biology majors, and Biology 141, along with Chemistry 141, should be taken in the fall of the Freshman year by prospective biology majors; Biology 142 and Chemistry 142 in spring of the Freshman year. If scheduling precludes taking both, it is recommended that you take Chemistry 141 before Biology 141. Biology 141 and 142 are prerequisites for all upper level biology courses. AP credit does not count for these courses but may be applied toward the general education requirement (GER) in the Life Sciences. These courses now include the material previously offered in Biology 143 (Genetics) and meet the biology premedical requirements. Biology 120 is recommended for non-science majors who are not premed but who wish to satisfy the Life Science Lab requirement for the GER. Some lecture and lab exams may be administered in the evening (dates and times to be determined). Prerequisite: Biology 141. Corequisite or prerequisite: Chemistry 141.

BIOLOGY 190 (000): Freshman Seminar: Mismeasure of Woman, Mismeasure of Man?
Marsteller and Anderson, TT, 1:00-2:15, MAX: 9, Woodruff Libaray 214

(Same as NBB 190S (001); MAX: 9)

Content: How do men and women differ? What components of intelligence, disease incidence, behavior, and physiology in different populations of humans are biological and what differences are better explained by culture, economic influences, and other factors? Do political and cultural conditions influence scientific explanations and research agendas?

This course will examine a number of hypotheses about sex, gender, and ethnic differences in intelligence, brain function, and physiology. After discussing several essay collections that address these issues, students will work in groups and will choose a particular issue and conduct a review of the current state of the evidence.

Texts:
· Fausto-Sterling, Anne. Myths of Gender: Biological Theories About Women and Men, 2nd Edition (1992) . (Basic Books) (REQUIRED)
· Gould, Stephen J. The Mismeasure of Man. (W.W. Norton & Co.) (REQUIRED)

Recommended Texts (on reserve):
· Fausto-Sterling, Anne. Sexing the Body.
· Devlin, Fienburg, Resnick, and Roeder. Intelligence, Genes, and Success: Scientists Respond to the Bell Curve.
· Gardner, Howard. Frames of Mind: Theories of Multiple Intelligences.
· Peterson, Dale and Richard Wrangham. Demonic Males: Apes and the Origins of Human Violence (1997). (Mariner Books)

Particulars: Open to Freshmen only. The class will be structured in seminar format. Seminar style courses for first year students are designed to introduce scholarly in-depth study of an area allowing students to learn the critical reading and analytical skills required for scholarly approaches to subjects and disciplines. It is our hope that students will take, in these courses, their first steps toward autonomy and independence of thought. To do so, students must learn to recognize fallacies of argument, to discern whether evidence presented in support of an idea is reliable, reasonable, and as unbiased as possible. They must learn to find evidence in support of opposing arguments and interpretations. They must question rather than believe. They must learn to use the Internet, the library, and other teachers to answer questions they generate.

In these classes, the role and responsibility of the teacher is not to dispense information and fact, but instead to guide development, to be proactive, to encourage, and to instill love of learning. Teachers can help students make connections to other disciplines and to the "real world". In short, the teacher is more "the guide on the side; not the sage on the stage".

The role of the students is different from what many have experienced. Although listening and recording skills are important, students have the often novel responsibility of questioning, reflecting deeply on the course material, finding new information, identifying learning issues, and relating course content to previous beliefs, ideas, and conceptions.

In this iteration of this class, we have decided on using a problem based learning (PBL) / investigative case (IC) pedagogy for much of the class, interspersed with readings and discussions and student led presentations. PBL/IC use stories and real problems and cases to engage students in their own learning. The evidence suggests that these methods increase interest, increase long term retention of the subject matter, and help students make connections. More about what to expect in the PBL/IC handout.

BIOLOGY 190 (001): Freshman Seminar: Science for Citizens - Mapping the Internet
Siegler, TTh, 11:30-12:45, MAX: 18, 1462 Clifton Road, Room 109

Content: This course will be a collaborative adventure. Together as a class we will investigate the resources and tools available on the internet for educating ourselves about scientific issues of the day. We will consider a diversity of sites, ranging from organizational web pages, blogs, and video resources. Class assignments will be determined according to the interests and technical abilities of the class participants, but could include constructing and writing a blog, aggregating information from "best sites", and video making and editing.

Text: None.

Particulars: Open to Freshmen only.

BIOLOGY 190 (002): Freshman Seminar: 21st Century Medicine: Experiments, Ethics, and Issues
Yedvobnick, TT, 10:00-11:15, MAX: 18, 1462 Clifton Road, Room 126

Content: How are the human genome sequence, recombinant DNA, and mammalian cloning methods influencing the next generation of medicine? How will genetic disease be diagnosed and treated using this new information? Are gene therapy clinical trials worth the risks? Can human stem cells reverse spinal cord injury? Should there be restrictions on stem cell experimentation? Should fear of human cloning impact therapeutic cloning? Why are HIV and malaria such difficult global health issues? These are representative topics that will be addressed in this class.

Text: None.

Particulars: Open to Freshmen only. After several lecture and instructor-led discussions, the class will be largely based on student presentations and discussions. A major goal of this class is to have students learn to give an oral presentation. Primary reading will be literature reviews and Web materials. A strong interest and background in Biology is recommended.

BIOLOGY 190 (003): Freshman Seminar: DNA and Forensics
Campbell, TT, 4:00-5:15, MAX: 18, 1462 Clifton Road, Room 100A

Content: Topics to be covered include the basics of DNA structure, the development of techniques used in modern genetic research, and how DNA is used in forensic analyses.

Text: Weinberg, Samantha. Pointing from the Grave: A True Story of Murder and DNA. (2003) (Miramax Books)

Particulars: Open to Freshmen only. The class will be discussion-based, with little formal lecture. Grading will be based on class participation and case-study presentations.

BIOLOGY 190 (004): Freshman Seminar: Of Mics and Men: Interactions Between Microorganisms and Humans
Jones, Wed, 1:00-3:30, MAX: 18, 1462 Clifton Road, Room 126

Content: This seminar will explore several of the relationships, both harmful and beneficial, that exist between humans and microorganisms. Topics that will be covered include evidence for ancient microbial plagues, the impact of infectious diseases on colonization of the New World, examples of natural immunity in humans produced by microbes, microorgansms and cancer, and others. Students will learn some basic microbiology in addition to exploring elements of human-microbe interactions.

Text: None.

Particulars: Open to Freshmen only. Students will be expected to give two seminar presentations to the class, participate in class discussions, and complete at least one writing assignment. Grades will be assigned based on in-class preparation, the seminar presentations, and the writing assignments.

BIOLOGY 190 (005): Freshman Seminar: The Botany of Human Vice - The Co-Evolution of Plants and People - CANCELED
Zimmerman, MWF, 11:45-12:35, MAX: 18, Tarbutton Hall 106

Content: Plants and people have evolved together to satisfy humankind's most basic desires for sweetness, beauty, intoxication, and well-being while also promoting plant survival. But how and why do plants do this, what do plants gain by these processes, and how have they influenced human history and biology? We will explore the science of plants' form, function, and flexibility as they provide human sustenance and pleasure while also supporting plant survival and propagation.

Text: Pollan, Michael. The Botany of Desire - A Plant's Eye View of The World (2002). (Random House) (REQUIRED)

Particulars: Open to Freshmen only. The course format includes lectures, discussions, and student-led presentations. A written assignment will also be completed during the semester. Grading will be based on in-class participation, presentation, and writing assignment.

BIOLOGY 206 (000): The Biology of Parasites, w/Lab
Starnes, MWF, 9:35-10:25, MAX: 48, 1462 Clifton Road, Room 308(Formerly Biology 470)

\NOTE: YOU MUST ALSO REGISTER FOR A 206 LABORATORY. Dates and times are as follows:

LAB:
LA1, M, 2:30-5:30, MAX: 24, 1462 Clifton Road, Room 124
LC1, W, 2:30-5:30, MAX: 24, 1462 Clifton Road, Room 124

Content: The lecture portion of this course will provide students with an introduction to modern and classical parasitology. Emphasis will be placed on protozoan, helminthic, and arthropod parasites of medical significance. Topics addressed will include basic principles of parasitology, ecological and societal considerations, evolutionary trends, epidemiology, life cycles, host-parasite coadaptive responses, therapeutic measures, and control programs.Relying upon microscopic evaluation, digital images, and preserved specimen dissections, the laboratory will assess a variety of parasites, along with their vectors. Ongoing group discussions of applicable case studies and assigned readings will facilitate further investigation and appreciation of pertinent host/parasite interactions.

Texts:
· Roberts and Janovy. Foundations of Parasitology, 7th Edition. (WCB/McGraw-Hill) (REQUIRED)
· Zimmer, Carl. Parasite Rex: Inside the Bizarre World of Nature's Creatures. (Simon & Schuster, Inc.) (REQUIRED)

Particulars: Course grades will be determined by 2 lecture exams (midterm and final) and 2 laboratory exams. Lecture and lab are both taught by Dr. Starnes. Prerequisites: Biology 141 and 142.

BIOLOGY 302 (000): Biochemistry II
Kelly / Lutz (Chemistry), TTh, 1:00-2:15, MAX: 30, White Hall 206 (Same as CHEM 302 (000); MAX: 100)

Content: This course builds on principles developed in Chem/Biol 301 and will focus on how simple metabolic pathways expanded and were incorporated into more complex biochemical systems during the evolution of the eukaryotic genome. Aspects of molecular evolution, parasitic and symbiotic relations, and compartmentalization will be developed from a metabolic perspective. Specific examples will include the evolution and integration of the mitochondrian and chloroplast genomes into the eukaryotic cell, and the role of compartmentalization in gene expression, energy regulation, and anabolic/catabolic regulation.

Text: Garrett, Reginald and Charles M. Grisham. Biochemistry, 3rd Edition (Thomson Publishing)

Particulars: This course is the second semester of a two-semester sequence in introductory biochemistry, which is offered jointly by the Biology and Chemistry Departments. Completion of both courses should provide students with a firm foundation in biochemistry. Prerequisites: Biology 141 and 142; Chemistry 222. Completion of Biology/Chemistry 301 is strongly recommended.

BIOLOGY 325 (000): Primate Social Psychology
de Waal (Psychology) , TTh, 11:30-12:45, MAX: 30, White Hall 112 (Same as PSYC 325 (000); MAX: 50)

Content: Following a general introduction to primatology, this course covers recent progress in the growing field of primate social behavior. Topics range from aggression and dominance (e.g., warfare and power politics among chimpanzees) to affiliation, sex, and peaceful coexistence (e.g., parental behavior, behavioral sex differences, conflict resolution). The evolution of the large brain and remarkable intelligence of primates has been explained as related to the complexity of their societies: survival in such societies requires sophisticated social skills and a thorough understanding of the relationship network. Course segments focus on the motivational and cognitive processes underlying coalition formation, reciprocal exchange of benefits, reconciliation following conflict, and the origin of moral systems. Parallels with human behavior will be discussed.

Text: Required reading includes two books and articles assigned at the beginning of the course.

Particulars: Prerequisites: Biology 141 and 142. This course originates in the Psychology Department.

BIOLOGY 330 (000): Chemistry, Biology, and Molecular Modeling
Snyder (Chemistry), MW, 12:50-1:40, MAX: 9, Emerson 363 (Same as Chem 330 (000); MAX:12)

Content: The course is designed to put to use what you already know about chemistry and biology and to extend it in two directions. On the one hand, we will examine the world around us as reflected by the media, the web, and encounters in your own lives. Thus, we'll examine issues around 'natural and unnatural molecules', the environment, disease, and society in the context of topics such as drugs, molecules from mars, aging, AIDS, bioterrorism, and crime in the courtroom. On the other hand, we will examine these ideas by means of computer graphics, the molecular structure of small molecules and proteins, and energy.

Texts: TBA.

Particulars: Prerequisites: Biology 141 and 142 and Chemistry 171/172 or 221. This course originates in the Chemistry Department.

BIOLOGY 336 (000): Human Physiology
Stokes, MWF, 8:30-9:20, MAX: 140, 1462 Clifton Road, Room 230

Content: A study of human physiology emphasizing homeostatic mechanisms of integrated body functions. Topics include neurophysiology, endocrinology, muscle physiology, cardiology, immunology, respiration, gastroenterology, and urology.

Texts:
· Widmaier, E., H. Raff, and K. Strang. Vander et. al's Human Physiology, 10th Edition. (McGraw-Hill)
· Stokes, Darrell R. Course Packet for Biology 336 - Spring 2008. (Tavenner Publishing Company) (Will be available in the Emory University Book Store.)

Particulars: Four in-class tests. Prerequisites: Biology 141 and 142 or permission of instructor.

BIOLOGY 341 (000): Evolutionary Biology
Beck, MWF, 10:40-11:30, MAX: 40, 1462 Clifton Road, Room 308

Content: A study of the factors that cause genetic change and of the evolutionary consequences of such changes. Topics include population genetics, adaptation and natural selection, evolution of genes, proteins and genomes, sexual selection, kin selection, speciation, and diversification of taxa. Emphasis on molecular, genetic, ecological, and evolutionary factors related to variation and adaptation to environment, and constraints on adaptation.

Text: Freeman, Scott and Jon C. Herron. Evolutionary Analysis, 4th Edition. (Prentice-Hall)

Particulars: Three tests and a comprehensive final. Discussion of current and classic literature and group presentations will be required. Prerequisites: Biology 141, 142, and 143 (old program) or Biology 141 and 142 (new program).

BIOLOGY 353 (000): Genetics of Complex Traits ***NEW***
Tao, TTh, 11:30-12:45, MAX: 60, 1462 Clifton Road, Room 308

Content: Many traits of biological importance are often "complex" in that they are controlled by more than one single gene. Genetic analyses of these complex traits are often sophisticated. A large body of theoretical and experimental methodology has been developed to study complex traits, with successful stories of identifying individual genes including those that underlie human diseases. There are two goals for this 4-credit course: (1) understanding the fundamental principles and methodology of quantitative genetics, and (2) exposure to current primary literature on genetic analyses of complex traits such as human diseases.

Texts:
· Falconer, D.S. and T.F.C. Mackay. Introduction to Quantitative Genetics. (Longman)
· Classic and current primary literature on case studies.
· Lecture notes will also be provided.

Particulars: Biology 341 and one of the following or equivalent (Math 111/112, Math 115/116, Math 107) will be helpful but not essential. This course will count for Column C in the Biology major. Prerequisites: Biology 141 and 142.

BIOLOGY 360 (000): Introduction to Neurobiology
TBA, TTh, 10:00-11:15, MAX: 5; 1462 Clifton Road, Room 100C (Same as NBB 301 (000); MAX: 22)

Content: The first part of this course will focus on the electrophysiological properties of neurons, a crucial first step for understanding brain function. We will discuss the generation and propagation of action potentials, neurotransmitter release, and how ion channels and receptors determine the membrane potential and ultimately whether or not the action potential is passed to the next neuron. Also, we will examine the pasticity of this system and how the synapse is changed by learning. The second part of this course will expand upon these neuronal properties to investigate the processing of somatosensory and motor information.

Text: Kandel, Schwartz, and Jessell. Principles of Neural Science, 4th Edition. (McGraw-Hill)

Particulars: Exams: Three 1-1/2 hour in-class exams and a comprehensive final. There will also be a required review session for one hour each week. Prerequisites: Completion of Chemistry 141 and 142 and Biology 141 and 142 is required; completion or concurrent enrollment in Intro Physics is strongly recommended. Cross listed as NBB 301.

BIOLOGY 370 (000): Introduction to Microbiology
Jones, TTh, 10:00-11:15, MAX: 50, 1462 Clifton Road, Room 308

Content: This course will present the basic elements of microbiology, including the study of viruses but emphasizing bacteriology. Topics to be covered will include the following: the tools of microbiology, microbial taxonomy and evolution, microbial physiology, microbial biochemistry, microbial genetics, and microbial pathogenesis. The implications of microbiology on medicine, environment, basic research, and biotechnology will be discussed.There is an optional 2-credit hour lab associated with the course (Biology 370L-Introduction to Microbiology Laboratory) that will be taught in Fall 2008.

Text: Madigan, Martinko, and Parker. Brock's Biology of Microorganisms, 11th Edition. (Prentice-Hall)

Particulars: There will be three exams and a paper. Prerequisites: Biology 141 and 142. For students under the old Biology major programs (Fall 1998), Biology 143 (Genetics w/lab) is recommended but not required. This course, taken together with Biology 370L, meets the upper level laboratory requirement for students under the Fall 2006 or later Biology major programs.

BIOLOGY 371 (000): Ecology of the Tropics
Wilson, L. (Fernbank Science Center), Tu, 2:30-4:40, MAX: 12, Emerson 102 (2 Credit Hours) (Same as ENVS 371 (000); MAX: 12)

Text: A variety of published papers and selected readings from books will be utilized.

Particulars: Grading is based on class participation, short written assignments, and a final exam. 2 credit hours. Prerequisites: Biology 141 and 142. Cross-listed as ENVS 371.

BIOLOGY 372 (00P): Ecology of the Tropics - Field Course
Wilson, L. (Fernbank Science Center), March 7-16, 2008, MAX: 6 (2 Credit Hours) (Same as ENVS 372 (00P); MAX: 6)

Text: Krichner, J. and W.E. Davis. A Neotropical Companion, 2nd Edition (1997). (Princeton University Press).

Particulars: Students who completed BIOL 371 / ENVS 371 in Spring 2007 or are enrolled in the Spring 2008 semester are eligible for this course. Prerequisites: Biology 141, 142, and 371. Permission of instructor is required. Registration and deposit for the field trip is due by noon, November 30th, 2007. (See Barbara Shannon in the Biology Department, room 2006, for further information and to obtain an application packet.)

BIOLOGY 402SWR (00P): Neuroscience Live ***NEW***
Jaeger, TTh, 4:00-5:15, MAX: 20, 1462 Clifton Road, Room 126

Content: This advanced seminar covers current topics of neuroscience research and the intellectual and experimental challenges involved. It is a hands-on writing intensive seminar, where you learn to read and critique research papers, and how to write a grant proposal. The authors of the research papers chosen will give seminars at Emory University, and you will be able to interact with them in a 'live' format, after having read their work. The necessary preparation with respect for background literature, research methods, and data analyses will be prepared in interactions with graduate students and postdoc study group advisors primarily during class time. In the last 1/3rd of the semester, you will read some successful NSRA predoctoral grant proposals written by Emory Neuroscience graduate students, and these proposals will be discussed. The final writing assignment will consist of a grant proposal written by the students.

Text: Kandel, Schwartz, and Jessell. Principles of Neural Science, 5th Edition. (McGraw-Hill) (NOTE: This text is mainly used as a resource of background information.)

Particulars: Prerequisites: Biology 142 is a prerequisite to BIOL 402SWR and BIOL 360/NBB 301 is a pre- or corequisite, meaning it can be taken in an earlier semester, or in the same semester. The course grade will be assigned 60% based on writing assignments and 40% based on powerpoint presentations in class. Permission of instructor is required.

BIOLOGY 415 (000): Cancer Biology and Oncogenes
Orloff, TTh, 2:30-3:45, MAX: 60, 1462 Clifton Road, Room 308

Content: The cellular pathways regulating cell division, differentiation, and migration are examined through a focus on the mechanisms by which cancers grow and spread. Topics will include: 1) oncogenes and tumor suppressor genes, 2) mechanisms of tumor initiation, 3) regulation of cell proliferation, 4) apoptosis (programmed cell death), 5) angiogenesis (blood vessel formation), 6) metastasis, 7) pathology, and 8) cancer treatments. Lectures and discussions will emphasize the experimental basis for our current understanding of cancer biology.

Text: Primary research and review articles wll be assigned throughout the course.

Particulars: This course will include lectures, invited speakers, discussions, and oral presentations by students. Through study of the primary literature, students will develop skills in identfying and analyzing the logic of the experiments. There will be quizzes, a mid-term, and a final exam. Prerequisites: Biology 141, 142, and 143 (old program) or Biology 141 and 142 (new program).

BIOLOGY 430S (000): Human Genome Project and Diseases
Yokoyama, TT, 10:00-11:15, MAX: 20, 1462 Clifton Road, Room 100A

NOTE: This course is not the same as Biology 470, Human Genome: Promise & Perils, taught by Dr. John Lucchesi.

Content: In 1980, it was proposed to construct a genetic linkage map of the human genome. Since then, the nucleotide sequence of the entire genome has been almost completely characterized. This course examines the historical background and process of completion of the human genome project. We will then not only study how the linkage map and massive DNA sequence can be used in identifying the genes that cause various human diseases, but also how these diseases are maintained in human populations.

Text: None.

Particulars: Prerequisites: Biology 141, 142, and 143 (old program) or Biology 141 and 142 (new program), and an interest in quantitative methods. The course will have lectures, student presentations of original literature, and class discussions. All students are expected to read roughly one original paper every 2-3 weeks. Grades will be based on presentations and class participation.

BIOLOGY 440S (00P): Animal Communication
Gouzoules (Psychology), TTh, 1:00-2:15, MAX: 8, Psychology 332 (Same as PSYC 440S; MAX: 8)

Content: From the dance of the honey bee, the "honest advertising" of frogs, and the question of why birds sing, to the symbolic abilities of primates and dolphins, recent studies of animal communication have provided considerable insight into the evolutionary origins of human language. What do animals communicate about? How do signals and displays originate? Do animals deceive one another? How do social and physical environments influence communication? Does communication provide a window on the cognitive abilities of animals? These and other questions will be explored in the seminar.

Text: Original source material, discussed in seminar format.

Particulars: Grades will be based on class participation and one paper (approximately 15 pages). There will be a large amount of reading for the course. Permission of instructor is required prior to enrollment and priority is given to students who have taken PSYC 320/BIOL 320. Prerequisites: Biology 141 and 142. This course originates in the Psychology Department.

BIOLOGY 450 (00P): Computational Neuroscience
Jaeger / Calabrese, MW, 4:00-6:00, MAX: 8, 1462 Clifton Road, Room 109(Same as IBS 534; MAX: 8)

Text: Bower, James M. and David Beeman. The Book of GENESIS. (Free on-line at www.genesis-sim.org.)

Particulars: Grades will be determined through homework exercises and a final exam. Prerequisites: Biology 141, 142, and 360/NBB 301. Permission of instructor is required prior to enrollment.

BIOLOGY 463S (000): Population Biology and Evolution of Disease
Levin, TTh, 4:00-6:00, with occasional sessions on Wednesdays, 4:00-5:00, MAX: 20, 1462 Clifton Road, Room 101 (Same as IBS 591)

Content: Infectious diseases as well as cancers and coronary artery diseases will be treated as population dynamic and evolutionary phenomena. Primary consideration will be given to five topics: (1) the within-host population and evoutionary dynamics of microparasite (viruses, bacteria, and protozoa) infections, the immune defenses, and the treatment of these infections with antibiotics and other chemotherapeutic agents; (2) the epidemiology of infectious diseases and their control by vaccination, prophylaxis, and chemotherapy, with a particular emphasis on influenza, HIV/AIDS, and malaria, (3) the evolution of parasite virulence (why parasites harm their hosts), (4) the somatic cell population biology and evolution of neoplasms (cancers) and their metastasis, and (5) the evolution of senescence and its implication for the extending the human life span.

Texts:
· Wilson, E.O. and W.H. Bossert. A Primer of Population Biology. (Sinauer)
· Abramson, John. Overdosed America: The Broken Promise of American Medicine. (Harper Perennial)

Particulars: The course will include lectures, discussion, and oral reports by students. Each student will be responsible for at least one report that will be presented both orally and in writing. Grades will be based on the quality of these reports and the magnitude and enthusiasm of participation in discussions. Prerequisites: Biology 141, 142, and 143 (old program) or Biology 141 and 142 (new program), college level mathematics and calculus, and an intense interest in this subject.

BIOLOGY 465 (000): Molecular Genetics - CANCELED
McLane, TTh, 1:00-2:15, MAX: 60, 1462 Clifton Road, Room 308

Content: This class explores genetic mechanisms in eukaryotes, regulation of gene expression, and recombinant DNA research. Geared towards developing a strong understanding of the scientific method by studying commonly used laboratory techniques and primary literature. The class will be a combination of lecture and class discussion.

Text: Assigned readings of specific textbook chapters and articles in the primary literature.

Particulars: Prerequisites: Biology 141 and 142. Cell biology or biochemistry is strongly recommended. An interest in biological research is preferred.

BIOLOGY 470 (001): Special Topics in Biology: Plant Biology w/Practicum
Ayalew, MWF, 11:45-12:35, MAX: 24, 1462 Clifton Road, Room 100A

Practicum: M, 2:30-5:30, 1462 Clifton Road, Room 119

Content: For biology/science majors. Topics covered include plant structure, function, growth, development, physiology, and systematics. The goal is to understand cellular and morphological features that distinguish plants from other eukaryotic organisms, their life cycle, their specific metabolic pathways such as photosynthesis, as well as their evolutionary relationships.

Text: Raven, Peter H., Ray F. Evert, and Susan E. Eichhorn. Biology of Plants, 7th Edition. (W.H. Freeman)

Particulars: Prerequisites: Biology 141 and 142. This course fulfills the requirements for Column B and meets the upper-level laboratory requirement for the Fall 2006 and later Biology major programs.

BIOLOGY 470 (002): Special Topics in Biology: The Biology of Sustainability w/Practicum ***NEW*** - CANCELED
Brommer, MWF, 12:50-1:40, MAX: 24, 1462 Clifton Road, Room 100A

Practicum: W, 1:40-3:50, MAX: 24, 1462 Clifton Road, Room 119

Content: This course will be taught as a lecture with a separate lab (practicum). Lecture. The lecture portion will cover the biological reasoning and rationale for different sustainable practices. This course involves some advanced chemistry, ecology, and environmental science. Lecture is co-operative and highly interactive. Students will learn and utilize biology concepts to justify and integrate sustainable practices at Emory University or in DeKalb County, Georgia. Lab. Students will use global information systems, chemistry, biology, and some quantitative methods to assess and explain sustainable practices described in lecture. Many labs will be designed and executed by the students themselves. Often, lecture and lab times may become interchangeable. Field trips are possible each week.

Texts: TBA.

Particulars: 2 exams, quizzes, solving case studies, short writing assignments, and a final group research/reporting project are part of the student grade assessment. Lecture and lab grades will be figured together for the final course grade. Prerequisites: Biology 141 and 142 or permission of instructor. This course fulfills the requirements for Column C and meets the upper level laboratory requirement for students under the Fall 2006 and later Biology major programs.

BIOLOGY 470 (003): Special Topics in Biology: Microbiology - Up Close and Personal
Campbell, MWF, 4:00-4:50, MAX: 60, 1462 Clifton Road, Room 308

Texts:
· Levy, Stuart B. The Antibiotic Paradox, 2nd Edition. (Perseus Publishing) (REQUIRED)
· Tierno, Philip M., Jr., Ph.D. The Secret Life of Germs: What They Are, Why We Need Them, and How We Can Protect Ourselves Against Them. (Atria Books) (REQUIRED)
· Several original articles and reviews.
· Madigan, Martinko, and Parker. Brock's Biology of Microorganisms, 11th Edition. (Prentice-Hall) (RECOMMENDED)

Particulars: Prerequisites: Biology 141, 142, and 370. The class will be structured around lectures, discussions, and debates. Grades will be determined by 2 non-cumulative exams, active class participation, and a 7-10 page paper. This course fulfills the Column A requirement for the Biology majors.

BIOLOGY 470 (004): Special Topics in Biology: Epigenetics and Human Disease ***NEW***
Corces, TTh, 1:00-2:15, MAX: 60, 1462 Clifton Road, Room 308

Content: Epigenetics attempts to explain phenotypic changes that are not caused by mutations (changes in the sequence of DNA). For example, identical twins have exactly the same DNA sequence but their behavior and susceptibility to disease is not exactly the same. Recent studies suggest that these differences are caused by modifications to the DNA that do not affect its sequence, as well as changes in the structure of the chromatin that can be inherited from one generation to the next. New evidence suggests that the first steps in cancer development may be epigenetic rather than mutations in the DNA. We will discuss the molecular mechanisms involved in epigenetic changes and how these changes can explain cancer, aging, or differences between stem cells and differentiated tissues.

Texts:
· Assigned readings of review articles.
· Allison, E.A. Fundamental Molecular Biology. (Blackwell Publishing) (OPTIONAL) (Textbook is not required, but may be helpful.)

Particulars: Prerequisites: Biology 141 and 142. The class will be structured around lectures and discussions. Grades will be determined by 3 non-cumulative exams. This course fulfills the Column A requirement for the Biology majors. (This course is not listed on the current Biology major program requirements).

BIOLOGY 470 (005): Special Topics in Biology: Math Concepts in the Neurosciences ***NEW***
Olifer, MWF, 10:40-11:30, MAX: 10, 1462 Clifton Road, Room 100A

(Same as NBB 470 (001); MAX: 10)

Content: This course is intended for NBB majors and Biology majors with interest in the Neurosciences. It is a self-contained introduction to key mathematical concepts and reasoning in the Neurosciences. The topics in the Neurosciences include 1) neuronal coding, 2) neuronal network dynamics, and 3) learning and memory in neural networks. These topics will be addressed with the help of algebra, differential and difference equations, probability theory, and others.

Texts:
· Adler, F.R. Modeling the Dynamics of Life. (Brooks/Cole)
· Dayan and Abbott. Theoretical Neuroscience: Computational and Mathematical Modeling of Neural Systems. (MIT Press)

Particulars: Grading will be based on biweekly quizzes, a midterm exam, and a final exam. A discussion section will be scheduled on the first day of class. Prerequisites: NBB 301/Biology 360 will be a useful background; knowledge of calculus is not required but is a plus. This course will fulfill elective credit for the Biology majors.

BIOLOGY 470S (000): Senior Seminar: Human Genome: Promise and Perils
Lucchesi, Tu, 10:00-12:30, MAX: 20, 1462 Clifton Road, Room 101

NOTE: This course is not the same as Biology 430S, Human Genome Project and Diseases, taught by Dr. Shozo Yokoyama.

Content: The complete sequencing of the human genome is offering unlimited opportunities for healthcare such as the ability to predict the onset of genetic diseases and the susceptibility to infectious agents. The other side of the coin is a fundamental infringement on the right of privacy that could have serious economic consequences.

Texts: Assigned readings of specific textbook chapters and articles in the primary literature.

Particulars: The class will be discussion-based, with little formal lecture. Grading will be based on class participation and case-study presentations. Prerequisites: Biology 141 and 142. This course fulfills the Column A requirement for the Biology majors. (This course is not listed on the current Biology major program requirements).

BIOLOGY 470S (002): Senior Seminar: Foundations of Disease Ecology
Real, TTh, 2:30-3:45, MAX: 10, Rollins Research Center, Room 1133

Content: Infectious diseases account for approximately 46% of human mortality (~20 million deaths) per year. Diseases once believed controlled are experiencing an unprecedented resurgence. What accounts for this current re-emergence and how should we study the dynamics of infectious disease as a biological process? In this seminar, we will trace the history of the contemporary conceptual framework for understanding infectious diseases as ecological and evolutionary biological systems. We will read classic papers and book chapters from the history of epidemiology (e.g., Hippocrates Airs, Waters, and Places and John Snow's analysis of the great cholera epidemic in London), the history of medicine (e.g., Louis Pasteur's development of a rabies vaccine), and the history of disease ecology (e.g., contemporary papers on the evolution of influenza and the emergence of malaria and tuberculosis). The course objective is to have students understand the intellectual development of our current understanding of infectious disease epidemiology.

Text: Assigned readings.

Particulars: Students will be required to write a review paper and give an oral presentation. The paper will focus on a particular disease of the student's choice. The paper should review the historical understandng of this disease and how the epidemology of that disease has been differently understood at different times in history. Prerequisites: Biology 141 and 142. This course fulfills the Column C requirement for the Biology majors. (This course is not listed on the current Biology major program requirements).

BIOLOGY 470SWR (00P & 01P): Senior Seminar: Perspectives in Chemistry
(00P) Lynn, TTh, 2:30-3:45, MAX: TBA, Emerson 401
(01P) Lynn / Rosa-Rodriguez, TTh, 1:00-2:15, MAX: TBA, Emerson 401

Content: Capstone Seminar unifying perspectives from the Natural and Social sciences with the Humanities. From Galileo to Dolly the Sheep, science has constantly developed new ideas that have challenged conventional thought, oftentimes driving society mad trying to reconcile these new ideas with existing ones. It's amazing to consider that the scientific method has been the driving force behind these discoveries and that the results are powerful enough to change science and society in remarkable ways. So what is so special about the scientific method? How is it affecting our society? Emory Researchers are making new discoveries that will challenge our society both today and tomorrow. In this class we will examine the "method to the madness" of 5 current Emory Resarchers, exploring these questions. Can we convince cancer cells to act normal again? Could we one day tap into the inner workings of organisms and direct them to follow our commands just by simply adding a molecule? How could life emerge from dirt, air, and water? Can an analysis of how fruitflies defend themselves from parasitic wasps provide insight into the viability of humans ingesting a "poison" as a preventive medicine? Can we learn what plants ancient Americans consumed and then determine their cultural practices and how we might also benefit from those plants and practices? After learnng about these discoveries, you will be challenged to apply the scientific method to propose your own ideas that might just turn tomorrow's world upside down.

Texts: None.

Particulars: Prerequisites: Biology 141 and 142. Cross-listed as Chem 468SWR, Phys 380RS, ArtHist 485SWR. Permission of instructor is required.

BIOLOGY 475 (000): Biology of the Eye
Edelhauser / Nickerson (Emory Eye Center/Ophthalmology), MWF, 9:35-10:25, MAX: 30, Emory Clinic B, Calhoun Auditorium(Same as IBS 548)

Content: A course designed for juniors, seniors, and graduate students who may be interested in a basic understanding of the eye. This course will review basic principles and state-of-the-art information on ocular anatomy, embryology, biochemistry, physiology, genetics, immunology, microbiology, pharmacology, and pathology. This course will provide a fascinating insight into the overall function of the eye.

Text: A course outline will be used with the appropriate text for each lecture.

Particulars: The course will have three didactic lectures with discussion per week. Course grade will be determined by two mid-term exams and one final. Graduate students will be required to write a term paper. Prerequisites: Biology 141 and 142.

BIOLOGY 480 (000): Modeling Biological Systems
Antia, TT, 10:00-11:15, MAX: 20, 1462 Clifton Road, Room 109 (Computer Lab)

NOTE: YOU MUST ALSO REGISTER FOR BIOLOGY 480L -- the Laboratory Section of this class -- concurrently (i.e., during the same semester).

Content: This course is an introduction to "systems biology". We will focus on how biological systems can be described in terms of mathematical models, how these models can be analyzed, and how the resulting insights obtained can give us an insight into the working of the system being analyzed. In doing so, we will focus on the interplay between theoretical and experimental biology. This course, taken together with Biology 480L, fulfills the upper-level laboratory requirement for students under the Fall 2006 and later Biology major programs.

Text: Allman, Elizabeth and John Rhodes. Mathematical Models in Biology (2004). (Cambridge University Press)

Particulars: In addition to lecture, there is a required lab session (Biology 480L). Prerequisites: Biology 141 and 142, and at least one calculus class at the level of Math 111 (Math 115/116 is preferable), and a desire to learn more mathematics.

BIOLOGY 480L (000): Modeling Biological Systems LAB
Antia, Tu, 1:00-2:15, MAX: 20, 1462 Clifton Road, Room 109 (2 Credit Hours)

NOTE: YOU MUST ALSO REGISTER FOR BIOLOGY 480 -- the Lecture Section of this class -- concurrently (i.e., during the same semester).

Content: This is the laboratory component (2 credit hours) to the course on Modeling Biological Systems (Biology 480). During the laboratory component of this course, you will be: (i) introduced to computer modeling (Mathematica, R); (ii) model biological systems (an application of ideas covered in the lecture section of the class); and (iii) participate in a project modeling a biological system of your choice.

Texts: We will use two programs: Mathematica and R.

Particulars: The lab session session is required along with the lecture portion (Biology 480). Prerequisites: Biology 141 and 142, at least one calculus class at the level of Math 111 (Math 115/116 is preferable), and a desire to learn more mathematics.

BIOLOGY 495A* / 495BWR* (00P): Honors Research
Yedvobnick(*Formerly BIology 495R/495RWR)

Particulars: Senior Biology Honors students should take Biology 495A in the Fall semester and 495BWR in the Spring semester. Those graduating in the Fall semester should take 495BWR in the Fall. (NOTE: Second semester juniors who will graduate in a Fall semester must register for the Honors Program the prior Fall semester. You cannot register for Honors in the Spring semester.) For more information, go to the webpage for the Honors Program in Biology. Permission of instructor is required for both Biology 495A and 495BWR. Contact Barbara Shannon via e-mail at barbara.shannon@biology.emory.edu or call 404-727-6294 to obtain a permission number.

BIOLOGY 497R (00P): Supervised Reading
Individual Faculty

(Permission of Barbara Shannon, Room 2006, Rollins Research Center, required.) Particulars: Variable credit, maximum 4 hours per semester. Readings are done in conjunction with a faculty member. Interested students should communicate with appropriate faculty and obtain their permission in advance of registration. This course does NOT count for the Biology major and does NOT fulfill the writing requirement. Prerequisites: Biology 141 and 142. Contact Barbara Shannon via e-mail at barbara.shannon@emory.edu or call 404-727-6294 to obtain a permission number.

BIOLOGY 499R (00P): Undergraduate Research
Individual Faculty

Particulars: Research participation open to sophomores, juniors, and seniors, by permission only. Prerequisites: Biology 141 and 142. Second-semester freshman standing and a declared major in Biology. The student must find a faculty member to supervise the research and SUBMIT AN APPLICATION FORM TO DR. RACHELLE SPELL, DIRECTOR OF UNDERGRADUATE RESEARCH, PRIOR TO REGISTRATION. ONCE THE APPLICATION HAS BEEN APPROVED, THE STUDENT MUST THEN REGISTER THROUGH NORMAL PROCEDURES. The application form and other detailed information regarding Biology 499 requirements can be obtained from the Undergraduate Education page of the Biology Department website . Variable credit, maximum 4 hours per semester. Under the new biology major, a maximum of 4 credits may be used to satisfy the requirements toward a Biology major; under the old biology major, Biology 499R credit may only be used for college credit and not toward the biology major.